Welcome to geneplot’s documentation!

Geneplot is a Python library for plotting single nucleotide polymorhpysm (SNP) data and protein domain information on the exon-intron structure of a gene. it takes as input standard files and formats generated from popular tools, including InterproScan, the General Feature Format v3 (GFF3) and the Variant Call Format (VCF). For more details see:

https://www.biorxiv.org/content/10.1101/2022.11.08.513416v1

• Code availability

https://github.com/gonzalezibeas/geneplot

• Installation

pip install geneplot

Contents:

• Modules
  • geneplot
• geneplot tutorial
  • Example 1.
  • Example 2.

Indices and tables

• Index

• Module Index